Analysis of Ligand-Protein Contacts in PDB entry:
3TRA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 3TRA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PSU
A
13 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 2
H2U
A
16 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 3
H2U
A
19 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 4
PSU
A
32 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 5
1MG
A
37 241N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 6
5MC
A
48 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 7
5MU
A
53 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 8
PSU
A
54 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 9
MG
A
76 1MAGNESIUM ION