Analysis of Ligand-Protein Contacts in PDB entry:
3UOM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 128 ligands in PDB entry 3UOM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MRD
A
401 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 2
MPD
A
402 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 3
MPD
A
403 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 4
MPD
A
404 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 5
MPD
A
405 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 6
MPD
A
406 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 7
MRD
A
407 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 8
CA
A
408 1CALCIUM ION
lig 9
CA
A
409 1CALCIUM ION
lig 10
CA
A
410 1CALCIUM ION
lig 11
CA
A
411 1CALCIUM ION
lig 12
CA
A
412 1CALCIUM ION
lig 13
CA
A
413 1CALCIUM ION
lig 14
CA
A
414 1CALCIUM ION
lig 15
CA
A
415 1CALCIUM ION
lig 16
CA
A
416 1CALCIUM ION
lig 17
CA
A
417 1CALCIUM ION
lig 18
CA
A
418 1CALCIUM ION
lig 19
CA
A
419 1CALCIUM ION
lig 20
CA
A
420 1CALCIUM ION
lig 21
CA
A
421 1CALCIUM ION
lig 22
MPD
B
401 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 23
MRD
B
402 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 24
MPD
B
403 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 25
MRD
B
404 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 26
MPD
B
405 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 27
MPD
B
406 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 28
MRD
B
407 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 29
CA
B
408 1CALCIUM ION
lig 30
CA
B
409 1CALCIUM ION
lig 31
CA
B
410 1CALCIUM ION
lig 32
CA
B
411 1CALCIUM ION
lig 33
CA
B
412 1CALCIUM ION
lig 34
CA
B
413 1CALCIUM ION
lig 35
CA
B
414 1CALCIUM ION
lig 36
CA
B
415 1CALCIUM ION
lig 37
CA
B
416 1CALCIUM ION
lig 38
CA
B
417 1CALCIUM ION
lig 39
CA
B
418 1CALCIUM ION
lig 40
CA
B
419 1CALCIUM ION
lig 41
CA
B
420 1CALCIUM ION
lig 42
CA
B
421 1CALCIUM ION
lig 43
CA
B
422 1CALCIUM ION
lig 44
MRD
C
401 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 45
MRD
C
402 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 46
MPD
C
403 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 47
MPD
C
404 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 48
MPD
C
405 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 49
MRD
C
406 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 50
MRD
C
407 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 51
CA
C
408 1CALCIUM ION
lig 52
CA
C
409 1CALCIUM ION
lig 53
CA
C
410 1CALCIUM ION
lig 54
CA
C
411 1CALCIUM ION
lig 55
CA
C
412 1CALCIUM ION
lig 56
CA
C
413 1CALCIUM ION
lig 57
CA
C
414 1CALCIUM ION
lig 58
CA
C
415 1CALCIUM ION
lig 59
CA
C
416 1CALCIUM ION
lig 60
CA
C
417 1CALCIUM ION
lig 61
CA
C
418 1CALCIUM ION
lig 62
CA
C
419 1CALCIUM ION
lig 63
CA
C
420 1CALCIUM ION
lig 64
CA
C
421 1CALCIUM ION
lig 65
CA
C
422 1CALCIUM ION
lig 66
MRD
D
401 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 67
MRD
D
402 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 68
MRD
D
403 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 69
MRD
D
404 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 70
MRD
D
405 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 71
MRD
D
406 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 72
MRD
D
407 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 73
CA
D
408 1CALCIUM ION
lig 74
CA
D
409 1CALCIUM ION
lig 75
CA
D
410 1CALCIUM ION
lig 76
CA
D
411 1CALCIUM ION
lig 77
CA
D
412 1CALCIUM ION
lig 78
CA
D
413 1CALCIUM ION
lig 79
CA
D
414 1CALCIUM ION
lig 80
CA
D
415 1CALCIUM ION
lig 81
CA
D
416 1CALCIUM ION
lig 82
CA
D
417 1CALCIUM ION
lig 83
CA
D
418 1CALCIUM ION
lig 84
CA
D
419 1CALCIUM ION
lig 85
CA
D
420 1CALCIUM ION
lig 86
CA
D
421 1CALCIUM ION
lig 87
CA
D
422 1CALCIUM ION
lig 88
MRD
E
401 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 89
MRD
E
402 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 90
MRD
E
403 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 91
MRD
E
404 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 92
MPD
E
405 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 93
MRD
E
406 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 94
CA
E
407 1CALCIUM ION
lig 95
CA
E
408 1CALCIUM ION
lig 96
CA
E
409 1CALCIUM ION
lig 97
CA
E
410 1CALCIUM ION
lig 98
CA
E
411 1CALCIUM ION
lig 99
CA
E
412 1CALCIUM ION
lig 100
CA
E
413 1CALCIUM ION
lig 101
CA
E
414 1CALCIUM ION
lig 102
CA
E
415 1CALCIUM ION
lig 103
CA
E
416 1CALCIUM ION
lig 104
CA
E
417 1CALCIUM ION
lig 105
CA
E
418 1CALCIUM ION
lig 106
CA
E
419 1CALCIUM ION
lig 107
MRD
F
501 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 108
MRD
F
502 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 109
MPD
F
503 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 110
MPD
F
504 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 111
MPD
F
505 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 112
MRD
F
506 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 113
MRD
F
507 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 114
MRD
F
508 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 115
CA
F
509 1CALCIUM ION
lig 116
CA
F
510 1CALCIUM ION
lig 117
CA
F
511 1CALCIUM ION
lig 118
CA
F
512 1CALCIUM ION
lig 119
CA
F
513 1CALCIUM ION
lig 120
CA
F
514 1CALCIUM ION
lig 121
CA
F
515 1CALCIUM ION
lig 122
CA
F
516 1CALCIUM ION
lig 123
CA
F
517 1CALCIUM ION
lig 124
CA
F
518 1CALCIUM ION
lig 125
CA
F
519 1CALCIUM ION
lig 126
CA
F
520 1CALCIUM ION
lig 127
CA
F
521 1CALCIUM ION
lig 128
CA
F
522 1CALCIUM ION