Analysis of Ligand-Protein Contacts in PDB entry:
3V8D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 3V8D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
HEM
A
601 43PROTOPORPHYRIN IX CONTAINING FE
lig 2
0GV
A
602 29(3BETA,8ALPHA,9BETA)-3-HYDROXYCHOLEST-5-EN
lig 3
SO4
A
603 5SULFATE ION
lig 4
SO4
A
604 5SULFATE ION
lig 5
SO4
A
605 5SULFATE ION
lig 6
UNX
A
606 1UNKNOWN ATOM OR ION
lig 7
UNX
A
607 1UNKNOWN ATOM OR ION
lig 8
UNX
A
608 1UNKNOWN ATOM OR ION
lig 9
UNX
A
609 1UNKNOWN ATOM OR ION
lig 10
UNX
A
610 1UNKNOWN ATOM OR ION
lig 11
HEM
B
601 43PROTOPORPHYRIN IX CONTAINING FE
lig 12
0GV
B
602 29(3BETA,8ALPHA,9BETA)-3-HYDROXYCHOLEST-5-EN
lig 13
SO4
B
603 5SULFATE ION
lig 14
SO4
B
604 5SULFATE ION
lig 15
SO4
B
605 5SULFATE ION
lig 16
UNX
B
606 1UNKNOWN ATOM OR ION
lig 17
UNX
B
607 1UNKNOWN ATOM OR ION
lig 18
UNX
B
608 1UNKNOWN ATOM OR ION
lig 19
UNX
B
609 1UNKNOWN ATOM OR ION
lig 20
UNX
B
610 1UNKNOWN ATOM OR ION
lig 21
UNX
B
611 1UNKNOWN ATOM OR ION
lig 22
UNX
B
612 1UNKNOWN ATOM OR ION
lig 23
UNX
B
613 1UNKNOWN ATOM OR ION
lig 24
UNX
B
614 1UNKNOWN ATOM OR ION