Analysis of Ligand-Protein Contacts in PDB entry:
3VDQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 3VDQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ACT
A
301 4ACETATE ION
lig 2
CL
A
302 1CHLORIDE ION
lig 3
NAD
A
303 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 4
ACT
B
301 4ACETATE ION
lig 5
CL
B
302 1CHLORIDE ION
lig 6
NAD
B
303 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 7
CA
B
304 1CALCIUM ION
lig 8
CA
C
301 1CALCIUM ION
lig 9
ACT
C
302 4ACETATE ION
lig 10
CL
C
303 1CHLORIDE ION
lig 11
NAD
C
304 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 12
ACT
D
301 4ACETATE ION
lig 13
CL
D
302 1CHLORIDE ION
lig 14
NAD
D
303 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE