Analysis of Ligand-Protein Contacts in PDB entry:
3VDR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 3VDR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CA
A
301 1CALCIUM ION
lig 2
CL
A
302 1CHLORIDE ION
lig 3
NAD
A
303 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 4
3HR
A
305 7(3R)-3-HYDROXYBUTANOIC ACID
lig 5
CA
B
301 1CALCIUM ION
lig 6
CL
B
302 1CHLORIDE ION
lig 7
NAD
B
303 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 8
3HR
B
305 7(3R)-3-HYDROXYBUTANOIC ACID
lig 9
NAD
C
301 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 10
3HR
C
303 7(3R)-3-HYDROXYBUTANOIC ACID
lig 11
CL
D
301 1CHLORIDE ION
lig 12
NAD
D
302 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 13
3HR
D
304 7(3R)-3-HYDROXYBUTANOIC ACID