Analysis of Ligand-Protein Contacts in PDB entry:
3VFK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 3VFK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CCS
A
76 10CARBOXYMETHYLATED CYSTEINE
lig 2
DAL
A
78 5D-ALANINE
lig 3
DAL
A
79 6D-ALANINE
lig 4
GHP
G
1 11(2R)-AMINO(4-HYDROXYPHENYL)ETHANOIC ACID
lig 5
3MY
G
2 133-CHLORO-D-TYROSINE
lig 6
3FG
G
3 12(2S)-AMINO(3,5-DIHYDROXYPHENYL)ETHANOIC AC
lig 7
GHP
G
4 11(2R)-AMINO(4-HYDROXYPHENYL)ETHANOIC ACID
lig 8
GHP
G
5 11(2R)-AMINO(4-HYDROXYPHENYL)ETHANOIC ACID
lig 9
OMX
G
6 13(BETAR)-BETA-HYDROXY-L-TYROSINE
lig 10
3FG
G
7 13(2S)-AMINO(3,5-DIHYDROXYPHENYL)ETHANOIC AC
lig 11
GCS
G
8 112-AMINO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
T55
G
9 118-METHYLNONANOIC ACID
lig 13
NAG
G
10 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
MAN
G
11 11ALPHA-D-MANNOPYRANOSE