Analysis of Ligand-Protein Contacts in PDB entry:
3VKB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 10 ligands in PDB entry 3VKB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
700 1MAGNESIUM ION
lig 2
MG
A
701 1MAGNESIUM ION
lig 3
CL
A
750 1CHLORIDE ION
lig 4
CL
A
752 1CHLORIDE ION
lig 5
POP
A
800 9PYROPHOSPHATE 2-
lig 6
FPS
A
900 24 TRIHYDROGEN THIODIPHOSPHATE
lig 7
MG
B
702 1MAGNESIUM ION
lig 8
CL
B
751 1CHLORIDE ION
lig 9
POP
B
800 9PYROPHOSPHATE 2-
lig 10
FPS
B
900 24 TRIHYDROGEN THIODIPHOSPHATE