Analysis of Ligand-Protein Contacts in PDB entry:
3VPB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 3VPB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ADP
A
500 27ADENOSINE-5'-DIPHOSPHATE
lig 2
GLU
A
501 10GLUTAMIC ACID
lig 3
MG
A
502 1MAGNESIUM ION
lig 4
ZN
A
503 1ZINC ION
lig 5
SO4
A
504 5SULFATE ION
lig 6
ADP
B
500 27ADENOSINE-5'-DIPHOSPHATE
lig 7
GLU
B
501 10GLUTAMIC ACID
lig 8
MG
B
502 1MAGNESIUM ION
lig 9
ZN
B
503 1ZINC ION
lig 10
SO4
B
504 5SULFATE ION
lig 11
ADP
C
500 27ADENOSINE-5'-DIPHOSPHATE
lig 12
GLU
C
501 10GLUTAMIC ACID
lig 13
MG
C
502 1MAGNESIUM ION
lig 14
SO4
C
503 5SULFATE ION
lig 15
SO4
C
504 5SULFATE ION
lig 16
ADP
D
500 27ADENOSINE-5'-DIPHOSPHATE
lig 17
GLU
D
501 10GLUTAMIC ACID
lig 18
MG
D
502 1MAGNESIUM ION
lig 19
SO4
D
503 5SULFATE ION
lig 20
SO4
D
504 5SULFATE ION
lig 21
ZN
E
100 1ZINC ION
lig 22
ZN
F
100 1ZINC ION