Analysis of Ligand-Protein Contacts in PDB entry:
3A50


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 3A50. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
HEM
A
412 43PROTOPORPHYRIN IX CONTAINING FE
lig 2
VD3
A
2001 28 YLIDENE]ETHYLI DENE]-4-METHYLIDENE-CYCLOH
lig 3
ACT
A
4006 4ACETATE ION
lig 4
CA
A
2501 1CALCIUM ION
lig 5
CA
A
2505 1CALCIUM ION
lig 6
CA
A
2506 1CALCIUM ION
lig 7
GOL
A
3001 6GLYCEROL
lig 8
GOL
A
3002 6GLYCEROL
lig 9
HEM
B
412 43PROTOPORPHYRIN IX CONTAINING FE
lig 10
VD3
B
2001 28 YLIDENE]ETHYLI DENE]-4-METHYLIDENE-CYCLOH
lig 11
HEM
C
412 43PROTOPORPHYRIN IX CONTAINING FE
lig 12
VD3
C
2001 28 YLIDENE]ETHYLI DENE]-4-METHYLIDENE-CYCLOH
lig 13
ACT
C
4004 4ACETATE ION
lig 14
ACT
C
4007 4ACETATE ION
lig 15
CA
C
2503 1CALCIUM ION
lig 16
HEM
D
412 43PROTOPORPHYRIN IX CONTAINING FE
lig 17
VD3
D
2001 28 YLIDENE]ETHYLI DENE]-4-METHYLIDENE-CYCLOH
lig 18
ACT
D
4001 4ACETATE ION
lig 19
CA
D
2502 1CALCIUM ION
lig 20
HEM
E
412 43PROTOPORPHYRIN IX CONTAINING FE
lig 21
VD3
E
2001 28 YLIDENE]ETHYLI DENE]-4-METHYLIDENE-CYCLOH
lig 22
ACT
E
4005 4ACETATE ION
lig 23
ACT
E
4008 4ACETATE ION
lig 24
CA
E
2504 1CALCIUM ION