Analysis of Ligand-Protein Contacts in PDB entry:
3A8W


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 7 ligands in PDB entry 3A8W. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
A
403 11PHOSPHOTHREONINE
lig 2
TPO
A
555 11PHOSPHOTHREONINE
lig 3
TPO
B
403 11PHOSPHOTHREONINE
lig 4
TPO
B
555 11PHOSPHOTHREONINE
lig 5
ATP
A
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 6
ATP
B
601 31ADENOSINE-5'-TRIPHOSPHATE
lig 7
SO4
B
611 5SULFATE ION