Analysis of Ligand-Protein Contacts in PDB entry:
3AF6


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 3AF6. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SSU
B
1 1URIDINE-5'-PHOSPHOROTHIOATE
lig 2
SSU
B
2 20URIDINE-5'-PHOSPHOROTHIOATE
lig 3
SSU
B
3 20URIDINE-5'-PHOSPHOROTHIOATE
lig 4
SSU
B
4 20URIDINE-5'-PHOSPHOROTHIOATE
lig 5
SSU
B
5 20URIDINE-5'-PHOSPHOROTHIOATE
lig 6
SSU
B
6 4URIDINE-5'-PHOSPHOROTHIOATE
lig 7
SSU
C
1 17URIDINE-5'-PHOSPHOROTHIOATE
lig 8
SSU
C
2 4URIDINE-5'-PHOSPHOROTHIOATE
lig 9
SO4
A
652 5SULFATE ION
lig 10
SO4
A
653 5SULFATE ION
lig 11
SO4
A
654 5SULFATE ION
lig 12
SO4
A
655 5SULFATE ION
lig 13
SO4
A
656 5SULFATE ION
lig 14
ZN
A
657 1ZINC ION
lig 15
ZN
A
658 1ZINC ION