Analysis of Ligand-Protein Contacts in PDB entry:
3AGV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 32 ligands in PDB entry 3AGV. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
UFT
S
6 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 2
CFZ
S
8 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 3
UFT
S
9 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 4
CFZ
S
10 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 5
CFZ
S
11 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 6
CFZ
S
20 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 7
UFT
S
21 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 8
CFZ
S
22 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 9
CFZ
S
23 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 10
UFT
U
6 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 11
CFZ
U
8 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 12
UFT
U
9 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 13
CFZ
U
10 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 14
CFZ
U
11 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 15
CFZ
U
20 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 16
UFT
U
21 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 17
CFZ
U
22 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 18
CFZ
U
23 202'-DEOXY-2'-FLUOROCYTIDINE 5'-(DIHYDROGEN
lig 19
MAN
C
1 12ALPHA-D-MANNOPYRANOSE
lig 20
MAN
C
2 11ALPHA-D-MANNOPYRANOSE
lig 21
NDG
C
3 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 22
GLA
C
4 11ALPHA-D-GALACTOPYRANOSE
lig 23
NDG
D
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 24
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 26
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 27
NAG
D
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
GAL
D
6 11BETA-D-GALACTOPYRANOSE
lig 29
MAN
D
7 11ALPHA-D-MANNOPYRANOSE
lig 30
FUL
D
8 10BETA-L-FUCOPYRANOSE
lig 31
CA
S
25 1CALCIUM ION
lig 32
CA
U
25 1CALCIUM ION