Analysis of Ligand-Protein Contacts in PDB entry:
3AKI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 3AKI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CL
A
501 1CHLORIDE ION
lig 2
NA
A
502 1SODIUM ION
lig 3
AH8
A
551 12(2R,3R,4R,5S)-2-AZIDO-5-(HYDROXYMETHYL)OXO
lig 4
AH8
A
561 12(2R,3R,4R,5S)-2-AZIDO-5-(HYDROXYMETHYL)OXO
lig 5
AH8
A
571 12(2R,3R,4R,5S)-2-AZIDO-5-(HYDROXYMETHYL)OXO
lig 6
AH8
A
581 12(2R,3R,4R,5S)-2-AZIDO-5-(HYDROXYMETHYL)OXO
lig 7
GOL
A
591 6GLYCEROL