Analysis of Ligand-Protein Contacts in PDB entry:
3AMV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 5 ligands in PDB entry 3AMV. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
14 10PHOSPHOSERINE
lig 2
GLC
A
998 12ALPHA-D-GLUCOPYRANOSE
lig 3
PLP
A
999 15PYRIDOXAL-5'-PHOSPHATE
lig 4
BIN
A
930 28 ISOPROPOXYCARBONYL-6-METHYL-PYRIDINIUM
lig 5
GOL
A
996 6GLYCEROL