Analysis of Ligand-Protein Contacts in PDB entry:
3B8W


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 3B8W. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
KCX
A
122 12LYSINE NZ-CARBOXYLIC ACID
lig 2
KCX
B
122 12LYSINE NZ-CARBOXYLIC ACID
lig 3
KCX
C
122 12LYSINE NZ-CARBOXYLIC ACID
lig 4
KCX
D
122 12LYSINE NZ-CARBOXYLIC ACID
lig 5
SO4
A
360 5SULFATE ION
lig 6
SO4
A
361 5SULFATE ION
lig 7
PLP
A
1001 15PYRIDOXAL-5'-PHOSPHATE
lig 8
SO4
B
360 5SULFATE ION
lig 9
SO4
B
361 5SULFATE ION
lig 10
SO4
B
362 5SULFATE ION
lig 11
PLP
B
1001 15PYRIDOXAL-5'-PHOSPHATE
lig 12
SO4
C
360 5SULFATE ION
lig 13
SO4
C
361 5SULFATE ION
lig 14
PLP
C
1001 15PYRIDOXAL-5'-PHOSPHATE
lig 15
SO4
D
360 5SULFATE ION
lig 16
PLP
D
1001 15PYRIDOXAL-5'-PHOSPHATE