Analysis of Ligand-Protein Contacts in PDB entry:
3BOG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 91 ligands in PDB entry 3BOG. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SYS
A
11 63-[(2-AMINO-2-OXOETHYL)SELANYL]-L-ALANINE
lig 2
SYS
B
11 63-[(2-AMINO-2-OXOETHYL)SELANYL]-L-ALANINE
lig 3
DCY
C
1 6D-CYSTEINE
lig 4
DLY
C
2 9D-LYSINE
lig 5
DAL
C
4 5D-ALANINE
lig 6
DAS
C
5 8D-ASPARTIC ACID
lig 7
DAL
C
7 5D-ALANINE
lig 8
DHI
C
8 10D-HISTIDINE
lig 9
DVA
C
10 7D-VALINE
lig 10
DSG
C
11 8D-ASPARAGINE
lig 11
DCY
C
13 6D-CYSTEINE
lig 12
DPR
C
14 7D-PROLINE
lig 13
DTH
C
16 7D-THREONINE
lig 14
DAL
C
17 5D-ALANINE
lig 15
DAL
C
19 5D-ALANINE
lig 16
DAL
C
20 5D-ALANINE
lig 17
DSN
C
22 6D-SERINE
lig 18
DVA
C
23 7D-VALINE
lig 19
DPR
C
26 7D-PROLINE
lig 20
DCY
C
28 6D-CYSTEINE
lig 21
DAS
C
29 8D-ASPARTIC ACID
lig 22
DHI
C
32 10D-HISTIDINE
lig 23
DSG
C
35 8D-ASPARAGINE
lig 24
DSG
C
38 8D-ASPARAGINE
lig 25
DSG
C
40 8D-ASPARAGINE
lig 26
DPR
C
41 7D-PROLINE
lig 27
DCY
C
43 6D-CYSTEINE
lig 28
DAL
C
44 5D-ALANINE
lig 29
DVA
C
47 7D-VALINE
lig 30
DAL
C
50 5D-ALANINE
lig 31
DAL
C
53 5D-ALANINE
lig 32
DSN
C
54 6D-SERINE
lig 33
DTH
C
57 7D-THREONINE
lig 34
DVA
C
59 7D-VALINE
lig 35
DAR
C
62 11D-ARGININE
lig 36
DLY
C
65 9D-LYSINE
lig 37
DSN
C
68 6D-SERINE
lig 38
DTH
C
70 7D-THREONINE
lig 39
DPR
C
71 7D-PROLINE
lig 40
DLY
C
72 6D-LYSINE
lig 41
DAL
C
74 5D-ALANINE
lig 42
DAS
C
75 8D-ASPARTIC ACID
lig 43
DAL
C
77 5D-ALANINE
lig 44
DPR
C
78 7D-PROLINE
lig 45
DAL
C
80 5D-ALANINE
lig 46
DPR
C
81 8D-PROLINE
lig 47
DCY
D
1 6D-CYSTEINE
lig 48
DLY
D
2 9D-LYSINE
lig 49
DAL
D
4 5D-ALANINE
lig 50
DAS
D
5 8D-ASPARTIC ACID
lig 51
DAL
D
7 5D-ALANINE
lig 52
DHI
D
8 10D-HISTIDINE
lig 53
DVA
D
10 7D-VALINE
lig 54
DSG
D
11 8D-ASPARAGINE
lig 55
DCY
D
13 6D-CYSTEINE
lig 56
DPR
D
14 7D-PROLINE
lig 57
DTH
D
16 7D-THREONINE
lig 58
DAL
D
17 5D-ALANINE
lig 59
DAL
D
19 5D-ALANINE
lig 60
DAL
D
20 5D-ALANINE
lig 61
DSN
D
22 6D-SERINE
lig 62
DVA
D
23 7D-VALINE
lig 63
DPR
D
26 7D-PROLINE
lig 64
DCY
D
28 6D-CYSTEINE
lig 65
DAS
D
29 8D-ASPARTIC ACID
lig 66
DHI
D
32 10D-HISTIDINE
lig 67
DSG
D
35 8D-ASPARAGINE
lig 68
DSG
D
38 8D-ASPARAGINE
lig 69
DSG
D
40 8D-ASPARAGINE
lig 70
DPR
D
41 7D-PROLINE
lig 71
DCY
D
43 6D-CYSTEINE
lig 72
DAL
D
44 5D-ALANINE
lig 73
DVA
D
47 7D-VALINE
lig 74
DAL
D
50 5D-ALANINE
lig 75
DAL
D
53 5D-ALANINE
lig 76
DSN
D
54 6D-SERINE
lig 77
DTH
D
57 7D-THREONINE
lig 78
DVA
D
59 7D-VALINE
lig 79
DAR
D
62 11D-ARGININE
lig 80
DLY
D
65 6D-LYSINE
lig 81
DSN
D
68 6D-SERINE
lig 82
DTH
D
70 7D-THREONINE
lig 83
DPR
D
71 7D-PROLINE
lig 84
DLY
D
72 9D-LYSINE
lig 85
DAL
D
74 5D-ALANINE
lig 86
DAS
D
75 8D-ASPARTIC ACID
lig 87
DAL
D
77 5D-ALANINE
lig 88
DPR
D
78 7D-PROLINE
lig 89
DAL
D
80 5D-ALANINE
lig 90
DPR
D
81 8D-PROLINE
lig 91
UNL
B
5014 8UNKNOWN LIGAND