Analysis of Ligand-Protein Contacts in PDB entry:
3BWR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 3BWR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
BGC
F
1 12BETA-D-GLUCOPYRANOSE
lig 2
GAL
F
2 11BETA-D-GALACTOPYRANOSE
lig 3
NGA
F
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 4
GAL
F
4 11BETA-D-GALACTOPYRANOSE
lig 5
SIA
F
5 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 6
BGC
G
1 12BETA-D-GLUCOPYRANOSE
lig 7
GAL
G
2 11BETA-D-GALACTOPYRANOSE
lig 8
NGA
G
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 9
GAL
G
4 11BETA-D-GALACTOPYRANOSE
lig 10
SIA
G
5 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 11
BGC
H
1 12BETA-D-GLUCOPYRANOSE
lig 12
GAL
H
2 11BETA-D-GALACTOPYRANOSE
lig 13
NGA
H
3 142-ACETAMIDO-2-DEOXY-BETA-D-GALACTOPYRANOSE
lig 14
GAL
H
4 11BETA-D-GALACTOPYRANOSE
lig 15
SIA
H
5 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 16
EDO
A
3 41,2-ETHANEDIOL
lig 17
EDO
A
9 41,2-ETHANEDIOL
lig 18
EDO
B
1 41,2-ETHANEDIOL
lig 19
EDO
C
2 41,2-ETHANEDIOL
lig 20
EDO
D
4 41,2-ETHANEDIOL
lig 21
EDO
E
5 41,2-ETHANEDIOL