Analysis of Ligand-Protein Contacts in PDB entry:
3BXI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 20 ligands in PDB entry 3BXI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
198 10PHOSPHOSERINE
lig 2
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
MAN
B
3 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 10
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
CA
A
606 1CALCIUM ION
lig 13
SCN
A
607 3THIOCYANATE ION
lig 14
NO3
A
608 4NITRATE ION
lig 15
NO3
A
609 4NITRATE ION
lig 16
NO3
A
610 4NITRATE ION
lig 17
NO3
A
611 4NITRATE ION
lig 18
NO3
A
612 4NITRATE ION
lig 19
HEM
A
613 43PROTOPORPHYRIN IX CONTAINING FE
lig 20
OSM
A
614 41-(OXIDOSULFANYL)METHANAMINE