Analysis of Ligand-Protein Contacts in PDB entry:
3CAP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 3CAP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
BMA
C
4 11BETA-D-MANNOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 10
BMA
E
4 11BETA-D-MANNOPYRANOSE
lig 11
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
BGL
A
801 202-O-OCTYL-BETA-D-GLUCOPYRANOSE
lig 14
BGL
A
802 202-O-OCTYL-BETA-D-GLUCOPYRANOSE
lig 15
BGL
A
803 202-O-OCTYL-BETA-D-GLUCOPYRANOSE
lig 16
BGL
A
804 202-O-OCTYL-BETA-D-GLUCOPYRANOSE
lig 17
PLM
A
901 17PALMITIC ACID
lig 18
BGL
B
805 202-O-OCTYL-BETA-D-GLUCOPYRANOSE
lig 19
BGL
B
806 202-O-OCTYL-BETA-D-GLUCOPYRANOSE
lig 20
PLM
B
902 17PALMITIC ACID