Analysis of Ligand-Protein Contacts in PDB entry:
3CIF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 3CIF. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
G3H
A
1337 10GLYCERALDEHYDE-3-PHOSPHATE
lig 2
NAD
A
5463 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 3
G3H
B
1338 10GLYCERALDEHYDE-3-PHOSPHATE
lig 4
NAD
B
5464 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 5
GOL
B
340 6GLYCEROL
lig 6
MG
B
341 1MAGNESIUM ION
lig 7
NAD
C
5465 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 8
GOL
C
340 6GLYCEROL
lig 9
G3H
C
1339 10GLYCERALDEHYDE-3-PHOSPHATE
lig 10
G3H
D
1340 10GLYCERALDEHYDE-3-PHOSPHATE
lig 11
NAD
D
5466 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 12
MG
D
340 1MAGNESIUM ION