Analysis of Ligand-Protein Contacts in PDB entry:
3COG


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 3COG. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PLP
A
500 15PYRIDOXAL-5'-PHOSPHATE
lig 2
2AG
A
501 8(2S)-2-AMINOPENT-4-ENOIC ACID
lig 3
GOL
A
603 6GLYCEROL
lig 4
NO3
A
608 4NITRATE ION
lig 5
PEG
A
609 7DI(HYDROXYETHYL)ETHER
lig 6
PLP
C
500 15PYRIDOXAL-5'-PHOSPHATE
lig 7
2AG
C
501 8(2S)-2-AMINOPENT-4-ENOIC ACID
lig 8
GOL
C
602 6GLYCEROL
lig 9
NO3
C
606 4NITRATE ION
lig 10
PLP
D
500 15PYRIDOXAL-5'-PHOSPHATE
lig 11
2AG
D
501 8(2S)-2-AMINOPENT-4-ENOIC ACID
lig 12
GOL
D
601 6GLYCEROL
lig 13
GOL
D
604 6GLYCEROL
lig 14
GOL
D
605 6GLYCEROL
lig 15
NO3
D
607 4NITRATE ION