Analysis of Ligand-Protein Contacts in PDB entry:
3D9J


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 3D9J. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NH4
A
301 1AMMONIUM ION
lig 2
NH4
A
302 1AMMONIUM ION
lig 3
NH4
A
303 1AMMONIUM ION
lig 4
NH4
A
304 1AMMONIUM ION
lig 5
NH4
A
305 1AMMONIUM ION
lig 6
NH4
A
306 1AMMONIUM ION
lig 7
SO4
A
2000 5SULFATE ION
lig 8
SO4
A
2001 5SULFATE ION
lig 9
SO4
A
2002 5SULFATE ION
lig 10
SO4
A
2003 5SULFATE ION
lig 11
SO4
A
2004 5SULFATE ION
lig 12
SO4
A
2005 5SULFATE ION
lig 13
GOL
A
1000 6GLYCEROL
lig 14
GOL
A
1001 6GLYCEROL
lig 15
GOL
A
1003 6GLYCEROL
lig 16
NH4
B
307 1AMMONIUM ION
lig 17
NH4
B
308 1AMMONIUM ION
lig 18
NH4
B
309 1AMMONIUM ION
lig 19
NH4
B
310 1AMMONIUM ION
lig 20
NH4
B
311 1AMMONIUM ION
lig 21
NH4
B
312 1AMMONIUM ION
lig 22
SO4
B
2006 5SULFATE ION
lig 23
SO4
B
2007 5SULFATE ION
lig 24
SO4
B
2008 5SULFATE ION
lig 25
SO4
B
2009 5SULFATE ION
lig 26
GOL
B
1002 6GLYCEROL