Analysis of Ligand-Protein Contacts in PDB entry:
3D9N


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 14 ligands in PDB entry 3D9N. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
Y
0 10PHOSPHOSERINE
lig 2
SEP
Y
2 10PHOSPHOSERINE
lig 3
SEP
Z
0 10PHOSPHOSERINE
lig 4
SEP
Z
2 10PHOSPHOSERINE
lig 5
SO4
A
1004 5SULFATE ION
lig 6
SO4
A
1010 5SULFATE ION
lig 7
SO4
A
1112 5SULFATE ION
lig 8
SO4
A
1113 5SULFATE ION
lig 9
SO4
A
1114 5SULFATE ION
lig 10
SO4
A
1115 5SULFATE ION
lig 11
SO4
B
1007 5SULFATE ION
lig 12
SO4
B
1008 5SULFATE ION
lig 13
SO4
B
1009 5SULFATE ION
lig 14
SO4
B
1111 5SULFATE ION