Analysis of Ligand-Protein Contacts in PDB entry:
3DAY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 3DAY. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MG
A
601 1MAGNESIUM ION
lig 2
MG
A
602 1MAGNESIUM ION
lig 3
CL
A
603 1CHLORIDE ION
lig 4
CL
A
604 1CHLORIDE ION
lig 5
CL
A
605 1CHLORIDE ION
lig 6
APC
A
606 31DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ES
lig 7
TRS
A
607 82-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
lig 8
UNX
A
681 1UNKNOWN ATOM OR ION
lig 9
UNX
A
682 1UNKNOWN ATOM OR ION
lig 10
UNX
A
683 1UNKNOWN ATOM OR ION
lig 11
UNX
A
684 1UNKNOWN ATOM OR ION
lig 12
UNX
A
685 1UNKNOWN ATOM OR ION
lig 13
UNX
A
686 1UNKNOWN ATOM OR ION
lig 14
UNX
A
687 1UNKNOWN ATOM OR ION
lig 15
UNX
A
688 1UNKNOWN ATOM OR ION
lig 16
UNX
A
689 1UNKNOWN ATOM OR ION
lig 17
UNX
A
690 1UNKNOWN ATOM OR ION
lig 18
UNX
A
691 1UNKNOWN ATOM OR ION
lig 19
GOL
A
608 6GLYCEROL