Analysis of Ligand-Protein Contacts in PDB entry:
3DC8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 3DC8. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
KCX
A
147 12LYSINE NZ-CARBOXYLIC ACID
lig 2
KCX
B
147 12LYSINE NZ-CARBOXYLIC ACID
lig 3
ZN
A
501 1ZINC ION
lig 4
ZN
A
502 1ZINC ION
lig 5
ACT
A
503 4ACETATE ION
lig 6
GOL
A
504 6GLYCEROL
lig 7
GOL
A
505 6GLYCEROL
lig 8
GOL
A
506 6GLYCEROL
lig 9
ZN
B
501 1ZINC ION
lig 10
ZN
B
502 1ZINC ION
lig 11
ACT
B
503 4ACETATE ION
lig 12
GOL
B
504 6GLYCEROL