Analysis of Ligand-Protein Contacts in PDB entry:
3DD2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 23 ligands in PDB entry 3DD2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CFL
B
6 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 2
CFL
B
11 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 3
UFT
B
12 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 4
UFT
B
17 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 5
CFL
B
19 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 6
UFT
B
20 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 7
UFT
B
21 202'-DEOXY-2'-FLUOROURIDINE 5'-(DIHYDROGEN P
lig 8
CFL
B
23 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 9
CFL
B
24 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 10
CFL
B
25 20 ARABINOFURANOSYL)PYRIMIDIN-2(1H)-ONE
lig 11
PEG
L
305 7DI(HYDROXYETHYL)ETHER
lig 12
0G6
H
1 30 PROLINAMIDE
lig 13
MG
H
1002 1MAGNESIUM ION
lig 14
P6G
H
1003 19HEXAETHYLENE GLYCOL
lig 15
ACY
H
1004 4ACETIC ACID
lig 16
ACY
H
1005 4ACETIC ACID
lig 17
ACY
H
1006 4ACETIC ACID
lig 18
ACY
H
1007 4ACETIC ACID
lig 19
MG
B
1000 1MAGNESIUM ION
lig 20
ACY
B
151 4ACETIC ACID
lig 21
ACY
B
152 4ACETIC ACID
lig 22
PEG
B
103 7DI(HYDROXYETHYL)ETHER
lig 23
PEG
B
104 7DI(HYDROXYETHYL)ETHER