Analysis of Ligand-Protein Contacts in PDB entry:
3DDL


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 27 ligands in PDB entry 3DDL. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SXN
A
1401 70SALINIXANTHIN
lig 2
UNL
A
1402 7UNKNOWN LIGAND
lig 3
UNL
A
1403 7UNKNOWN LIGAND
lig 4
UNL
A
1404 9UNKNOWN LIGAND
lig 5
UNL
A
1405 7UNKNOWN LIGAND
lig 6
UNL
A
1406 12UNKNOWN LIGAND
lig 7
UNL
A
1407 7UNKNOWN LIGAND
lig 8
UNL
A
1408 7UNKNOWN LIGAND
lig 9
UNL
A
1409 6UNKNOWN LIGAND
lig 10
RET
A
1301 20RETINAL
lig 11
SXN
B
1401 70SALINIXANTHIN
lig 12
UNL
B
1402 10UNKNOWN LIGAND
lig 13
UNL
B
1403 16UNKNOWN LIGAND
lig 14
UNL
B
1404 7UNKNOWN LIGAND
lig 15
UNL
B
1405 7UNKNOWN LIGAND
lig 16
UNL
B
1406 12UNKNOWN LIGAND
lig 17
UNL
B
1407 8UNKNOWN LIGAND
lig 18
UNL
B
1408 7UNKNOWN LIGAND
lig 19
UNL
B
1409 7UNKNOWN LIGAND
lig 20
UNL
B
1410 8UNKNOWN LIGAND
lig 21
UNL
B
1411 6UNKNOWN LIGAND
lig 22
UNL
B
1412 11UNKNOWN LIGAND
lig 23
UNL
B
1413 7UNKNOWN LIGAND
lig 24
UNL
B
1414 8UNKNOWN LIGAND
lig 25
RET
B
1301 20RETINAL
lig 26
PX4
B
1415 341,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLIN
lig 27
PCW
B
1416 401,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE