Analysis of Ligand-Protein Contacts in PDB entry:
3DEM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 3DEM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
A
1001 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
CA
A
3001 1CALCIUM ION
lig 3
CA
A
5001 1CALCIUM ION
lig 4
CA
A
8001 1CALCIUM ION
lig 5
CA
B
4001 1CALCIUM ION
lig 6
CA
B
6001 1CALCIUM ION
lig 7
CA
B
7001 1CALCIUM ION