Analysis of Ligand-Protein Contacts in PDB entry:
3DMT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 6 ligands in PDB entry 3DMT. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CCS
C
166 10CARBOXYMETHYLATED CYSTEINE
lig 2
NAD
A
360 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 3
NAD
B
360 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 4
NAD
C
360 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE
lig 5
GOL
C
361 6GLYCEROL
lig 6
NAD
D
360 44NICOTINAMIDE-ADENINE-DINUCLEOTIDE