Analysis of Ligand-Protein Contacts in PDB entry:
3DTU


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 57 ligands in PDB entry 3DTU. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DMU
A
567 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 2
DMU
A
1002 22DECYL-BETA-D-MALTOPYRANOSIDE
lig 3
DMU
A
1004 22DECYL-BETA-D-MALTOPYRANOSIDE
lig 4
DMU
A
1005 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 5
CU
A
1023 1COPPER (II) ION
lig 6
MG
A
1006 1MAGNESIUM ION
lig 7
CA
A
1007 1CALCIUM ION
lig 8
OH
A
1501 1HYDROXIDE ION
lig 9
PO4
A
1001 5PHOSPHATE ION
lig 10
HEA
A
1502 60HEME-A
lig 11
HEA
A
1503 60HEME-A
lig 12
TRD
A
1504 13TRIDECANE
lig 13
TRD
A
1505 11TRIDECANE
lig 14
TRD
A
1506 13TRIDECANE
lig 15
TRD
A
1009 7TRIDECANE
lig 16
TRD
A
1010 11TRIDECANE
lig 17
TRD
A
1013 7TRIDECANE
lig 18
TRD
A
1014 7TRIDECANE
lig 19
TRD
A
1015 11TRIDECANE
lig 20
DMU
B
1003 23DECYL-BETA-D-MALTOPYRANOSIDE
lig 21
DMU
B
1011 23DECYL-BETA-D-MALTOPYRANOSIDE
lig 22
CU
B
1022 1COPPER (II) ION
lig 23
CU
B
1004 1COPPER (II) ION
lig 24
CD
B
1008 1CADMIUM ION
lig 25
CD
B
1009 1CADMIUM ION
lig 26
CD
B
1010 1CADMIUM ION
lig 27
TRD
B
1023 9TRIDECANE
lig 28
TRD
B
1012 9TRIDECANE
lig 29
TRD
B
1031 9TRIDECANE
lig 30
HTO
B
1 10HEPTANE-1,2,3-TRIOL
lig 31
DMU
C
567 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 32
DMU
C
568 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 33
CU
C
569 1COPPER (II) ION
lig 34
MG
C
570 1MAGNESIUM ION
lig 35
CA
C
571 1CALCIUM ION
lig 36
OH
C
572 1HYDROXIDE ION
lig 37
PO4
C
573 5PHOSPHATE ION
lig 38
HEA
C
574 60HEME-A
lig 39
HEA
C
575 60HEME-A
lig 40
DXC
C
576 28(3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLA
lig 41
TRD
C
577 13TRIDECANE
lig 42
TRD
C
578 11TRIDECANE
lig 43
TRD
C
579 7TRIDECANE
lig 44
TRD
C
580 9TRIDECANE
lig 45
TRD
C
581 11TRIDECANE
lig 46
TRD
C
582 7TRIDECANE
lig 47
TRD
C
583 7TRIDECANE
lig 48
TRD
C
584 7TRIDECANE
lig 49
DMU
D
11 33DECYL-BETA-D-MALTOPYRANOSIDE
lig 50
CU
D
3 1COPPER (II) ION
lig 51
CU
D
4 1COPPER (II) ION
lig 52
CD
D
8 1CADMIUM ION
lig 53
CD
D
9 1CADMIUM ION
lig 54
TRD
D
7 13TRIDECANE
lig 55
TRD
D
288 9TRIDECANE
lig 56
TRD
D
12 11TRIDECANE
lig 57
TRD
D
23 7TRIDECANE