Analysis of Ligand-Protein Contacts in PDB entry:
3DYF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 3DYF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
A
3002 1MAGNESIUM ION
lig 2
MG
A
3003 1MAGNESIUM ION
lig 3
MG
A
3004 1MAGNESIUM ION
lig 4
ACT
A
8001 4ACETATE ION
lig 5
NI9
A
3001 183-FLUORO-1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL
lig 6
IPR
A
6001 14ISOPENTYL PYROPHOSPHATE
lig 7
MPD
A
7001 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 8
MG
B
4002 1MAGNESIUM ION
lig 9
MG
B
4003 1MAGNESIUM ION
lig 10
MG
B
4004 1MAGNESIUM ION
lig 11
NI9
B
4001 183-FLUORO-1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL
lig 12
BME
B
9001 4BETA-MERCAPTOETHANOL
lig 13
IPR
B
6002 14ISOPENTYL PYROPHOSPHATE