Analysis of Ligand-Protein Contacts in PDB entry:
3DYP

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 139 ligands in PDB entry 3DYP. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	MG	A	3001	1	MAGNESIUM ION
lig 2	MG	A	3002	1	MAGNESIUM ION
lig 3	MG	A	3005	1	MAGNESIUM ION
lig 4	NA	A	3101	1	SODIUM ION
lig 5	NA	A	3102	1	SODIUM ION
lig 6	NA	A	3103	1	SODIUM ION
lig 7	NA	A	3104	1	SODIUM ION
lig 8	MG	A	3105	1	MAGNESIUM ION
lig 9	MG	A	3106	1	MAGNESIUM ION
lig 10	DMS	A	8401	4	DIMETHYL SULFOXIDE
lig 11	DMS	A	8402	4	DIMETHYL SULFOXIDE
lig 12	DMS	A	8403	4	DIMETHYL SULFOXIDE
lig 13	DMS	A	8404	4	DIMETHYL SULFOXIDE
lig 14	DMS	A	8405	4	DIMETHYL SULFOXIDE
lig 15	DMS	A	8406	4	DIMETHYL SULFOXIDE
lig 16	DMS	A	8407	4	DIMETHYL SULFOXIDE
lig 17	DMS	A	8408	4	DIMETHYL SULFOXIDE
lig 18	DMS	A	8409	4	DIMETHYL SULFOXIDE
lig 19	DMS	A	8410	4	DIMETHYL SULFOXIDE
lig 20	DMS	A	8411	4	DIMETHYL SULFOXIDE
lig 21	DMS	A	8412	4	DIMETHYL SULFOXIDE
lig 22	DMS	A	8413	4	DIMETHYL SULFOXIDE
lig 23	DMS	A	8414	4	DIMETHYL SULFOXIDE
lig 24	DMS	A	8416	4	DIMETHYL SULFOXIDE
lig 25	DMS	A	8419	4	DIMETHYL SULFOXIDE
lig 26	DMS	A	8420	4	DIMETHYL SULFOXIDE
lig 27	DMS	A	8421	4	DIMETHYL SULFOXIDE
lig 28	DMS	A	8423	4	DIMETHYL SULFOXIDE
lig 29	DMS	A	8425	4	DIMETHYL SULFOXIDE
lig 30	DMS	A	8427	4	DIMETHYL SULFOXIDE
lig 31	DMS	A	8501	4	DIMETHYL SULFOXIDE
lig 32	DMS	A	8502	4	DIMETHYL SULFOXIDE
lig 33	DMS	A	8503	4	DIMETHYL SULFOXIDE
lig 34	DMS	A	8504	4	DIMETHYL SULFOXIDE
lig 35	DMS	A	8602	4	DIMETHYL SULFOXIDE
lig 36	MG	B	3001	1	MAGNESIUM ION
lig 37	MG	B	3002	1	MAGNESIUM ION
lig 38	NA	B	3101	1	SODIUM ION
lig 39	NA	B	3102	1	SODIUM ION
lig 40	NA	B	3103	1	SODIUM ION
lig 41	NA	B	3104	1	SODIUM ION
lig 42	MG	B	3105	1	MAGNESIUM ION
lig 43	DMS	B	8401	4	DIMETHYL SULFOXIDE
lig 44	DMS	B	8402	4	DIMETHYL SULFOXIDE
lig 45	DMS	B	8403	4	DIMETHYL SULFOXIDE
lig 46	DMS	B	8404	4	DIMETHYL SULFOXIDE
lig 47	DMS	B	8405	4	DIMETHYL SULFOXIDE
lig 48	DMS	B	8406	4	DIMETHYL SULFOXIDE
lig 49	DMS	B	8407	4	DIMETHYL SULFOXIDE
lig 50	DMS	B	8408	4	DIMETHYL SULFOXIDE
lig 51	DMS	B	8409	4	DIMETHYL SULFOXIDE
lig 52	DMS	B	8410	4	DIMETHYL SULFOXIDE
lig 53	DMS	B	8411	4	DIMETHYL SULFOXIDE
lig 54	DMS	B	8412	4	DIMETHYL SULFOXIDE
lig 55	DMS	B	8413	4	DIMETHYL SULFOXIDE
lig 56	DMS	B	8414	4	DIMETHYL SULFOXIDE
lig 57	DMS	B	8415	4	DIMETHYL SULFOXIDE
lig 58	DMS	B	8416	4	DIMETHYL SULFOXIDE
lig 59	DMS	B	8417	4	DIMETHYL SULFOXIDE
lig 60	DMS	B	8420	4	DIMETHYL SULFOXIDE
lig 61	DMS	B	8421	4	DIMETHYL SULFOXIDE
lig 62	DMS	B	8423	4	DIMETHYL SULFOXIDE
lig 63	DMS	B	8425	4	DIMETHYL SULFOXIDE
lig 64	DMS	B	8427	4	DIMETHYL SULFOXIDE
lig 65	DMS	B	8502	4	DIMETHYL SULFOXIDE
lig 66	DMS	B	8504	4	DIMETHYL SULFOXIDE
lig 67	DMS	B	8506	4	DIMETHYL SULFOXIDE
lig 68	DMS	B	8508	4	DIMETHYL SULFOXIDE
lig 69	DMS	B	8601	4	DIMETHYL SULFOXIDE
lig 70	MG	C	3001	1	MAGNESIUM ION
lig 71	MG	C	3002	1	MAGNESIUM ION
lig 72	MG	C	3004	1	MAGNESIUM ION
lig 73	MG	C	3006	1	MAGNESIUM ION
lig 74	NA	C	3101	1	SODIUM ION
lig 75	NA	C	3102	1	SODIUM ION
lig 76	NA	C	3103	1	SODIUM ION
lig 77	NA	C	3104	1	SODIUM ION
lig 78	MG	C	3105	1	MAGNESIUM ION
lig 79	DMS	C	8401	4	DIMETHYL SULFOXIDE
lig 80	DMS	C	8402	4	DIMETHYL SULFOXIDE
lig 81	DMS	C	8403	4	DIMETHYL SULFOXIDE
lig 82	DMS	C	8404	4	DIMETHYL SULFOXIDE
lig 83	DMS	C	8405	4	DIMETHYL SULFOXIDE
lig 84	DMS	C	8407	4	DIMETHYL SULFOXIDE
lig 85	DMS	C	8408	4	DIMETHYL SULFOXIDE
lig 86	DMS	C	8409	4	DIMETHYL SULFOXIDE
lig 87	DMS	C	8410	4	DIMETHYL SULFOXIDE
lig 88	DMS	C	8411	4	DIMETHYL SULFOXIDE
lig 89	DMS	C	8412	4	DIMETHYL SULFOXIDE
lig 90	DMS	C	8413	4	DIMETHYL SULFOXIDE
lig 91	DMS	C	8414	4	DIMETHYL SULFOXIDE
lig 92	DMS	C	8415	4	DIMETHYL SULFOXIDE
lig 93	DMS	C	8416	4	DIMETHYL SULFOXIDE
lig 94	DMS	C	8417	4	DIMETHYL SULFOXIDE
lig 95	DMS	C	8419	4	DIMETHYL SULFOXIDE
lig 96	DMS	C	8420	4	DIMETHYL SULFOXIDE
lig 97	DMS	C	8421	4	DIMETHYL SULFOXIDE
lig 98	DMS	C	8423	4	DIMETHYL SULFOXIDE
lig 99	DMS	C	8425	4	DIMETHYL SULFOXIDE
lig 100	DMS	C	8427	4	DIMETHYL SULFOXIDE
lig 101	DMS	C	8501	4	DIMETHYL SULFOXIDE
lig 102	DMS	C	8503	4	DIMETHYL SULFOXIDE
lig 103	DMS	C	8504	4	DIMETHYL SULFOXIDE
lig 104	DMS	C	8506	4	DIMETHYL SULFOXIDE
lig 105	DMS	C	8601	4	DIMETHYL SULFOXIDE
lig 106	DMS	C	8602	4	DIMETHYL SULFOXIDE
lig 107	MG	D	3001	1	MAGNESIUM ION
lig 108	MG	D	3002	1	MAGNESIUM ION
lig 109	NA	D	3101	1	SODIUM ION
lig 110	NA	D	3102	1	SODIUM ION
lig 111	NA	D	3103	1	SODIUM ION
lig 112	NA	D	3104	1	SODIUM ION
lig 113	MG	D	3105	1	MAGNESIUM ION
lig 114	DMS	D	8401	4	DIMETHYL SULFOXIDE
lig 115	DMS	D	8402	4	DIMETHYL SULFOXIDE
lig 116	DMS	D	8403	4	DIMETHYL SULFOXIDE
lig 117	DMS	D	8404	4	DIMETHYL SULFOXIDE
lig 118	DMS	D	8405	4	DIMETHYL SULFOXIDE
lig 119	DMS	D	8406	4	DIMETHYL SULFOXIDE
lig 120	DMS	D	8407	4	DIMETHYL SULFOXIDE
lig 121	DMS	D	8408	4	DIMETHYL SULFOXIDE
lig 122	DMS	D	8409	4	DIMETHYL SULFOXIDE
lig 123	DMS	D	8410	4	DIMETHYL SULFOXIDE
lig 124	DMS	D	8411	4	DIMETHYL SULFOXIDE
lig 125	DMS	D	8412	4	DIMETHYL SULFOXIDE
lig 126	DMS	D	8413	4	DIMETHYL SULFOXIDE
lig 127	DMS	D	8414	4	DIMETHYL SULFOXIDE
lig 128	DMS	D	8416	4	DIMETHYL SULFOXIDE
lig 129	DMS	D	8419	4	DIMETHYL SULFOXIDE
lig 130	DMS	D	8421	4	DIMETHYL SULFOXIDE
lig 131	DMS	D	8423	4	DIMETHYL SULFOXIDE
lig 132	DMS	D	8427	4	DIMETHYL SULFOXIDE
lig 133	DMS	D	8501	4	DIMETHYL SULFOXIDE
lig 134	DMS	D	8503	4	DIMETHYL SULFOXIDE
lig 135	DMS	D	8506	4	DIMETHYL SULFOXIDE
lig 136	DMS	D	8508	4	DIMETHYL SULFOXIDE
lig 137	DMS	D	8701	4	DIMETHYL SULFOXIDE
lig 138	DMS	D	8703	4	DIMETHYL SULFOXIDE
lig 139	DMS	D	8705	4	DIMETHYL SULFOXIDE

Analysis of Ligand-Protein Contacts in PDB entry: 3DYP

Analysis of Ligand-Protein Contacts in PDB entry:
3DYP