Analysis of Ligand-Protein Contacts in PDB entry:
3E80


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 3E80. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PCA
A
26 8PYROGLUTAMIC ACID
lig 2
PCA
B
26 8PYROGLUTAMIC ACID
lig 3
PCA
C
26 8PYROGLUTAMIC ACID
lig 4
MAN
D
1 11ALPHA-D-MANNOPYRANOSE
lig 5
GCU
D
2 12ALPHA-D-GLUCOPYRANURONIC ACID
lig 6
XYS
D
3 8ALPHA-D-XYLOPYRANOSE
lig 7
RAM
D
4 10ALPHA-L-RHAMNOPYRANOSE
lig 8
MAN
E
1 11ALPHA-D-MANNOPYRANOSE
lig 9
GCU
E
2 12ALPHA-D-GLUCOPYRANURONIC ACID
lig 10
XYS
E
3 8ALPHA-D-XYLOPYRANOSE
lig 11
RAM
E
4 10ALPHA-L-RHAMNOPYRANOSE
lig 12
MAN
F
1 11ALPHA-D-MANNOPYRANOSE
lig 13
GCU
F
2 12ALPHA-D-GLUCOPYRANURONIC ACID
lig 14
XYS
F
3 8ALPHA-D-XYLOPYRANOSE
lig 15
RAM
F
4 10ALPHA-L-RHAMNOPYRANOSE
lig 16
NDG
G
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 17
GCD
G
2 114-DEOXY-ALPHA-L-THREO-HEX-4-ENOPYRANURONIC
lig 18
NDG
H
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 19
GCD
H
2 114-DEOXY-ALPHA-L-THREO-HEX-4-ENOPYRANURONIC
lig 20
NDG
I
1 152-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 21
GCD
I
2 114-DEOXY-ALPHA-L-THREO-HEX-4-ENOPYRANURONIC
lig 22
ZN
A
1 1ZINC ION
lig 23
PO4
A
2 5PHOSPHATE ION
lig 24
PO4
A
3 5PHOSPHATE ION
lig 25
PO4
A
5 5PHOSPHATE ION
lig 26
PO4
A
9 5PHOSPHATE ION
lig 27
PO4
B
1 5PHOSPHATE ION
lig 28
ZN
B
2 1ZINC ION
lig 29
PO4
B
7 5PHOSPHATE ION
lig 30
PO4
B
8 5PHOSPHATE ION
lig 31
ZN
C
3 1ZINC ION
lig 32
PO4
C
4 5PHOSPHATE ION
lig 33
PO4
C
6 5PHOSPHATE ION