Analysis of Ligand-Protein Contacts in PDB entry:
3F86


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 86 ligands in PDB entry 3F86. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
ACE
A
0 3ACETYL GROUP
lig 2
B3M
A
2 9(3R)-3-AMINO-5-(METHYLSULFANYL)PENTANOIC A
lig 3
BIL
A
5 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 4
B3L
A
9 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 5
BIL
A
12 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 6
B3L
A
16 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 7
BIL
A
19 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 8
B3L
A
23 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 9
BIL
A
26 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 10
B3L
A
30 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 11
HMR
A
33 12BETA-HOMOARGININE
lig 12
ACE
B
0 3ACETYL GROUP
lig 13
B3M
B
2 9(3R)-3-AMINO-5-(METHYLSULFANYL)PENTANOIC A
lig 14
BIL
B
5 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 15
B3L
B
9 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 16
BIL
B
12 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 17
B3L
B
16 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 18
BIL
B
19 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 19
B3L
B
23 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 20
BIL
B
26 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 21
B3L
B
30 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 22
HMR
B
33 12BETA-HOMOARGININE
lig 23
ACE
C
0 3ACETYL GROUP
lig 24
B3M
C
2 7(3R)-3-AMINO-5-(METHYLSULFANYL)PENTANOIC A
lig 25
BIL
C
5 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 26
B3L
C
9 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 27
BIL
C
12 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 28
B3L
C
16 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 29
BIL
C
19 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 30
B3L
C
23 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 31
BIL
C
26 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 32
B3L
C
30 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 33
HMR
C
33 9BETA-HOMOARGININE
lig 34
ACE
D
0 3ACETYL GROUP
lig 35
B3M
D
2 9(3R)-3-AMINO-5-(METHYLSULFANYL)PENTANOIC A
lig 36
BIL
D
5 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 37
B3L
D
9 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 38
BIL
D
12 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 39
B3L
D
16 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 40
BIL
D
19 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 41
B3L
D
23 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 42
BIL
D
26 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 43
B3L
D
30 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 44
HMR
D
33 13BETA-HOMOARGININE
lig 45
ACE
E
0 3ACETYL GROUP
lig 46
B3M
E
2 9(3R)-3-AMINO-5-(METHYLSULFANYL)PENTANOIC A
lig 47
BIL
E
5 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 48
B3L
E
9 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 49
BIL
E
12 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 50
B3L
E
16 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 51
BIL
E
19 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 52
B3L
E
23 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 53
BIL
E
26 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 54
B3L
E
30 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 55
HMR
E
33 13BETA-HOMOARGININE
lig 56
ACE
F
0 3ACETYL GROUP
lig 57
B3M
F
2 9(3R)-3-AMINO-5-(METHYLSULFANYL)PENTANOIC A
lig 58
BIL
F
5 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 59
B3L
F
9 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 60
BIL
F
12 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 61
B3L
F
16 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 62
BIL
F
19 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 63
B3L
F
23 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 64
BIL
F
26 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 65
B3L
F
30 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 66
B3M
G
2 9(3R)-3-AMINO-5-(METHYLSULFANYL)PENTANOIC A
lig 67
BIL
G
5 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 68
B3L
G
9 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 69
BIL
G
12 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 70
B3L
G
16 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 71
BIL
G
19 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 72
B3L
G
23 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 73
BIL
G
26 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 74
B3L
G
30 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 75
HMR
G
33 9BETA-HOMOARGININE
lig 76
ACE
H
0 3ACETYL GROUP
lig 77
B3M
H
2 9(3R)-3-AMINO-5-(METHYLSULFANYL)PENTANOIC A
lig 78
BIL
H
5 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 79
B3L
H
9 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 80
BIL
H
12 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 81
B3L
H
16 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 82
BIL
H
19 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 83
B3L
H
23 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 84
BIL
H
26 9(3R,4S)-3-AMINO-4-METHYLHEXANOIC ACID
lig 85
B3L
H
30 9(3S)-3-AMINO-5-METHYLHEXANOIC ACID
lig 86
HMR
H
33 13BETA-HOMOARGININE