Analysis of Ligand-Protein Contacts in PDB entry:
3GBM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 3GBM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
A
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
A
4 11BETA-D-MANNOPYRANOSE
lig 7
NAG
A
335 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
EDO
A
336 41,2-ETHANEDIOL
lig 9
NAG
B
182 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
GOL
B
183 6GLYCEROL
lig 11
BMA
C
4 11BETA-D-MANNOPYRANOSE
lig 12
NAG
C
334 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
EDO
C
335 41,2-ETHANEDIOL
lig 14
NAG
D
182 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE