Analysis of Ligand-Protein Contacts in PDB entry:
3GDC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 3GDC. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CU
A
301 1COPPER (II) ION
lig 2
CU
A
303 1COPPER (II) ION
lig 3
CU
A
302 1COPPER (II) ION
lig 4
CU
A
304 1COPPER (II) ION
lig 5
CA
A
401 1CALCIUM ION
lig 6
CU
B
301 1COPPER (II) ION
lig 7
CU
B
303 1COPPER (II) ION
lig 8
CU
B
302 1COPPER (II) ION
lig 9
CU
B
304 1COPPER (II) ION
lig 10
CA
B
401 1CALCIUM ION
lig 11
CU
C
302 1COPPER (II) ION
lig 12
CU
C
304 1COPPER (II) ION
lig 13
CU
C
301 1COPPER (II) ION
lig 14
CU
C
303 1COPPER (II) ION
lig 15
CA
C
401 1CALCIUM ION