Analysis of Ligand-Protein Contacts in PDB entry:
3GFD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 7 ligands in PDB entry 3GFD. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
FMN
A
301 31FLAVIN MONONUCLEOTIDE
lig 2
IYR
A
302 143-IODO-TYROSINE
lig 3
GOL
A
1 6GLYCEROL
lig 4
GOL
A
3 6GLYCEROL
lig 5
FMN
B
301 31FLAVIN MONONUCLEOTIDE
lig 6
IYR
B
302 143-IODO-TYROSINE
lig 7
GOL
B
2 6GLYCEROL