Analysis of Ligand-Protein Contacts in PDB entry:
3GKR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 9 ligands in PDB entry 3GKR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
UMA
B
1 48URIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-
lig 2
FGA
B
2 9GAMMA-D-GLUTAMIC ACID
lig 3
DAL
B
4 5D-ALANINE
lig 4
DAL
B
5 6D-ALANINE
lig 5
MG
A
401 1MAGNESIUM ION
lig 6
MG
A
402 1MAGNESIUM ION
lig 7
MG
A
403 1MAGNESIUM ION
lig 8
GOL
A
404 6GLYCEROL
lig 9
ALA
B
101 5ALANINE