Analysis of Ligand-Protein Contacts in PDB entry:
3GML


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 3GML. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 11
FUC
D
6 10ALPHA-L-FUCOPYRANOSE
lig 12
NAG
A
288 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
C6Q
A
300 46 2,3-DIHYDROXYHEPTADECYL}-6-PHENYLHEXANAMI
lig 14
PLM
A
301 18PALMITIC ACID
lig 15
EDO
A
302 41,2-ETHANEDIOL
lig 16
EDO
A
303 41,2-ETHANEDIOL
lig 17
EDO
A
304 41,2-ETHANEDIOL
lig 18
EDO
B
100 41,2-ETHANEDIOL