Analysis of Ligand-Protein Contacts in PDB entry:
3GMR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 3GMR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 8
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 10
FUC
E
6 10ALPHA-L-FUCOPYRANOSE
lig 11
C8P
A
298 48 2,3-DIHYDROXYHEPTADECYL}-8-PHENYLOCTANAMI
lig 12
PLM
A
299 18PALMITIC ACID
lig 13
EDO
A
300 41,2-ETHANEDIOL
lig 14
EDO
A
301 41,2-ETHANEDIOL
lig 15
EDO
A
302 41,2-ETHANEDIOL
lig 16
EDO
A
303 41,2-ETHANEDIOL
lig 17
PG4
B
100 13TETRAETHYLENE GLYCOL