Analysis of Ligand-Protein Contacts in PDB entry:
3GP3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 14 ligands in PDB entry 3GP3. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
PG4
A
250 13TETRAETHYLENE GLYCOL
lig 2
PO3
A
251 4PHOSPHITE ION
lig 3
SEP
A
252 11PHOSPHOSERINE
lig 4
PG4
B
250 13TETRAETHYLENE GLYCOL
lig 5
PO3
B
251 4PHOSPHITE ION
lig 6
SEP
B
252 11PHOSPHOSERINE
lig 7
PG4
C
250 13TETRAETHYLENE GLYCOL
lig 8
PG4
C
251 13TETRAETHYLENE GLYCOL
lig 9
PO3
C
252 4PHOSPHITE ION
lig 10
SEP
C
253 11PHOSPHOSERINE
lig 11
PG4
D
250 13TETRAETHYLENE GLYCOL
lig 12
PG4
D
251 13TETRAETHYLENE GLYCOL
lig 13
PO3
D
252 4PHOSPHITE ION
lig 14
SEP
D
253 11PHOSPHOSERINE