Analysis of Ligand-Protein Contacts in PDB entry:
3GZB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 46 ligands in PDB entry 3GZB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
MRD
A
154 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 2
MPD
A
155 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 3
MRD
A
156 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 4
EDO
A
157 41,2-ETHANEDIOL
lig 5
EDO
A
158 41,2-ETHANEDIOL
lig 6
EDO
A
159 41,2-ETHANEDIOL
lig 7
MPD
B
154 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 8
EDO
B
155 41,2-ETHANEDIOL
lig 9
EDO
B
156 41,2-ETHANEDIOL
lig 10
EDO
B
157 41,2-ETHANEDIOL
lig 11
EDO
B
158 41,2-ETHANEDIOL
lig 12
EDO
B
159 41,2-ETHANEDIOL
lig 13
EDO
B
160 41,2-ETHANEDIOL
lig 14
MRD
C
154 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 15
MRD
C
155 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 16
MRD
C
156 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 17
EDO
C
157 41,2-ETHANEDIOL
lig 18
EDO
C
158 41,2-ETHANEDIOL
lig 19
MPD
D
154 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 20
EDO
D
155 41,2-ETHANEDIOL
lig 21
EDO
D
156 41,2-ETHANEDIOL
lig 22
EDO
D
157 41,2-ETHANEDIOL
lig 23
EDO
D
158 41,2-ETHANEDIOL
lig 24
MRD
E
154 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 25
MRD
E
155 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 26
MRD
E
156 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 27
EDO
E
157 41,2-ETHANEDIOL
lig 28
EDO
E
158 41,2-ETHANEDIOL
lig 29
EDO
E
159 41,2-ETHANEDIOL
lig 30
EDO
E
160 41,2-ETHANEDIOL
lig 31
MPD
F
154 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 32
MPD
F
155 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 33
EDO
F
156 41,2-ETHANEDIOL
lig 34
EDO
F
157 41,2-ETHANEDIOL
lig 35
EDO
F
158 41,2-ETHANEDIOL
lig 36
MRD
G
154 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 37
MRD
G
155 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 38
MRD
G
156 8(4R)-2-METHYLPENTANE-2,4-DIOL
lig 39
EDO
G
157 41,2-ETHANEDIOL
lig 40
EDO
G
158 41,2-ETHANEDIOL
lig 41
EDO
G
159 41,2-ETHANEDIOL
lig 42
EDO
G
160 41,2-ETHANEDIOL
lig 43
EDO
G
161 41,2-ETHANEDIOL
lig 44
MPD
H
154 8(4S)-2-METHYL-2,4-PENTANEDIOL
lig 45
EDO
H
155 41,2-ETHANEDIOL
lig 46
EDO
H
156 41,2-ETHANEDIOL