Analysis of Ligand-Protein Contacts in PDB entry:
3HDB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 3HDB. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
ZN
A
620 1ZINC ION
lig 4
CA
A
621 1CALCIUM ION
lig 5
CA
A
622 1CALCIUM ION
lig 6
CA
A
623 1CALCIUM ION
lig 7
2PE
A
650 13NONAETHYLENE GLYCOL
lig 8
2PE
A
651 13NONAETHYLENE GLYCOL
lig 9
2PE
A
652 13NONAETHYLENE GLYCOL
lig 10
2PE
A
653 10NONAETHYLENE GLYCOL
lig 11
CA
A
654 1CALCIUM ION
lig 12
CA
A
655 1CALCIUM ION
lig 13
CA
A
656 1CALCIUM ION
lig 14
CA
A
657 1CALCIUM ION
lig 15
CL
A
658 1CHLORIDE ION