Analysis of Ligand-Protein Contacts in PDB entry:
3HDK


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 13 ligands in PDB entry 3HDK. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NLE
A
36 8NORLEUCINE
lig 2
SMC
A
41 7S-METHYLCYSTEINE
lig 3
NLE
A
46 8NORLEUCINE
lig 4
AIB
A
51 6ALPHA-AMINOISOBUTYRIC ACID
lig 5
ABA
A
67 6ALPHA-AMINOBUTYRIC ACID
lig 6
ABA
A
95 6ALPHA-AMINOBUTYRIC ACID
lig 7
NLE
B
36 8NORLEUCINE
lig 8
SMC
B
41 7S-METHYLCYSTEINE
lig 9
NLE
B
46 8NORLEUCINE
lig 10
AIB
B
51 6ALPHA-AMINOISOBUTYRIC ACID
lig 11
ABA
B
67 6ALPHA-AMINOBUTYRIC ACID
lig 12
ABA
B
95 6ALPHA-AMINOBUTYRIC ACID
lig 13
2NC
B
0 54 [AMINO(IMINIO)METHYL]-L-ORNITHINAMIDE