Analysis of Ligand-Protein Contacts in PDB entry:
3HRD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 20 ligands in PDB entry 3HRD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SE
A
922 1SELENIUM ATOM
lig 2
NO3
A
5658 4NITRATE ION
lig 3
MG
A
426 1MAGNESIUM ION
lig 4
MG
A
427 1MAGNESIUM ION
lig 5
MOS
B
920 3DIOXOTHIOMOLYBDENUM(VI) ION
lig 6
MCN
B
921 44PTERIN CYTOSINE DINUCLEOTIDE
lig 7
NIO
B
5661 9NICOTINIC ACID
lig 8
FAD
C
900 53FLAVIN-ADENINE DINUCLEOTIDE
lig 9
NO3
C
5659 4NITRATE ION
lig 10
FES
D
907 4FE2/S2 (INORGANIC) CLUSTER
lig 11
FES
D
908 4FE2/S2 (INORGANIC) CLUSTER
lig 12
SE
E
922 1SELENIUM ATOM
lig 13
NIO
E
5660 9NICOTINIC ACID
lig 14
NO3
E
5662 4NITRATE ION
lig 15
CA
E
5663 1CALCIUM ION
lig 16
MOS
F
920 3DIOXOTHIOMOLYBDENUM(VI) ION
lig 17
MCN
F
921 44PTERIN CYTOSINE DINUCLEOTIDE
lig 18
FAD
G
900 53FLAVIN-ADENINE DINUCLEOTIDE
lig 19
FES
H
907 4FE2/S2 (INORGANIC) CLUSTER
lig 20
FES
H
908 4FE2/S2 (INORGANIC) CLUSTER