Analysis of Ligand-Protein Contacts in PDB entry:
3I04


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 3I04. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SF4
A
700 8IRON/SULFUR CLUSTER
lig 2
SF4
A
750 8IRON/SULFUR CLUSTER
lig 3
XCC
A
800 9FE(4)-NI(1)-S(4) CLUSTER
lig 4
CYN
A
900 2CYANIDE ION
lig 5
GOL
A
963 6GLYCEROL
lig 6
SF4
B
750 8IRON/SULFUR CLUSTER
lig 7
XCC
B
800 9FE(4)-NI(1)-S(4) CLUSTER
lig 8
CYN
B
900 2CYANIDE ION
lig 9
GOL
B
963 6GLYCEROL
lig 10
SF4
C
700 8IRON/SULFUR CLUSTER
lig 11
SF4
C
750 8IRON/SULFUR CLUSTER
lig 12
XCC
C
800 9FE(4)-NI(1)-S(4) CLUSTER
lig 13
CYN
C
900 2CYANIDE ION
lig 14
GOL
C
963 6GLYCEROL
lig 15
SF4
D
750 8IRON/SULFUR CLUSTER
lig 16
XCC
D
800 9FE(4)-NI(1)-S(4) CLUSTER
lig 17
CYN
D
900 2CYANIDE ION
lig 18
GOL
D
963 6GLYCEROL
lig 19
CU1
M
950 1COPPER (I) ION
lig 20
SF4
M
900 8IRON/SULFUR CLUSTER
lig 21
NI
M
951 1NICKEL (II) ION
lig 22
ACT
M
953 3ACETATE ION
lig 23
NA
M
1 1SODIUM ION
lig 24
CU1
N
950 1COPPER (I) ION
lig 25
SF4
N
900 8IRON/SULFUR CLUSTER
lig 26
NA
N
730 1SODIUM ION
lig 27
ACT
N
953 3ACETATE ION
lig 28
NI
N
951 1NICKEL (II) ION
lig 29
CU1
O
950 1COPPER (I) ION
lig 30
SF4
O
900 8IRON/SULFUR CLUSTER
lig 31
NA
O
730 1SODIUM ION
lig 32
NI
O
951 1NICKEL (II) ION
lig 33
ACT
O
953 3ACETATE ION
lig 34
CU1
P
950 1COPPER (I) ION
lig 35
SF4
P
900 8IRON/SULFUR CLUSTER
lig 36
NA
P
730 1SODIUM ION
lig 37
NI
P
951 1NICKEL (II) ION
lig 38
ACT
P
953 3ACETATE ION