Analysis of Ligand-Protein Contacts in PDB entry:
3JD8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 3JD8. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 8
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 13
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
A
1303 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
A
1309 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
A
1316 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
A
1317 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
A
1318 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
A
1319 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
A
1320 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
A
1321 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
A
1322 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
A
1323 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
A
1324 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
CLR
A
1325 28CHOLESTEROL