Analysis of Ligand-Protein Contacts in PDB entry:
3JQM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 48 ligands in PDB entry 3JQM. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GTP
A
158 32GUANOSINE-5'-TRIPHOSPHATE
lig 2
FLC
A
159 13CITRATE ANION
lig 3
GOL
A
160 6GLYCEROL
lig 4
GOL
A
161 6GLYCEROL
lig 5
EDO
A
162 41,2-ETHANEDIOL
lig 6
EDO
A
163 41,2-ETHANEDIOL
lig 7
PEG
A
164 7DI(HYDROXYETHYL)ETHER
lig 8
PEG
A
165 7DI(HYDROXYETHYL)ETHER
lig 9
GTP
B
158 32GUANOSINE-5'-TRIPHOSPHATE
lig 10
FLC
B
159 13CITRATE ANION
lig 11
EDO
B
160 41,2-ETHANEDIOL
lig 12
EDO
B
161 41,2-ETHANEDIOL
lig 13
EDO
B
162 41,2-ETHANEDIOL
lig 14
PEG
B
163 7DI(HYDROXYETHYL)ETHER
lig 15
GTP
C
158 32GUANOSINE-5'-TRIPHOSPHATE
lig 16
FLC
C
159 13CITRATE ANION
lig 17
GOL
C
160 6GLYCEROL
lig 18
EDO
C
161 41,2-ETHANEDIOL
lig 19
PEG
C
162 7DI(HYDROXYETHYL)ETHER
lig 20
GTP
D
158 32GUANOSINE-5'-TRIPHOSPHATE
lig 21
FLC
D
159 13CITRATE ANION
lig 22
EDO
D
160 41,2-ETHANEDIOL
lig 23
EDO
D
161 41,2-ETHANEDIOL
lig 24
GTP
E
158 32GUANOSINE-5'-TRIPHOSPHATE
lig 25
FLC
E
159 13CITRATE ANION
lig 26
PEG
E
160 7DI(HYDROXYETHYL)ETHER
lig 27
GTP
F
158 32GUANOSINE-5'-TRIPHOSPHATE
lig 28
FLC
F
159 13CITRATE ANION
lig 29
GOL
F
160 6GLYCEROL
lig 30
EDO
F
161 41,2-ETHANEDIOL
lig 31
EDO
F
162 41,2-ETHANEDIOL
lig 32
PEG
F
163 7DI(HYDROXYETHYL)ETHER
lig 33
GTP
G
158 32GUANOSINE-5'-TRIPHOSPHATE
lig 34
FLC
G
159 13CITRATE ANION
lig 35
EDO
G
160 41,2-ETHANEDIOL
lig 36
EDO
G
161 41,2-ETHANEDIOL
lig 37
EDO
G
162 41,2-ETHANEDIOL
lig 38
EDO
G
163 41,2-ETHANEDIOL
lig 39
GTP
H
158 32GUANOSINE-5'-TRIPHOSPHATE
lig 40
FLC
H
159 13CITRATE ANION
lig 41
GOL
H
160 6GLYCEROL
lig 42
EDO
H
161 41,2-ETHANEDIOL
lig 43
EDO
H
162 41,2-ETHANEDIOL
lig 44
PEG
H
163 7DI(HYDROXYETHYL)ETHER
lig 45
GTP
I
158 32GUANOSINE-5'-TRIPHOSPHATE
lig 46
FLC
I
159 13CITRATE ANION
lig 47
EDO
I
160 41,2-ETHANEDIOL
lig 48
EDO
I
161 41,2-ETHANEDIOL