Analysis of Ligand-Protein Contacts in PDB entry:
3K39


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 52 ligands in PDB entry 3K39. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
CA
A
1000 1CALCIUM ION
lig 3
BCZ
A
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 4
YT3
A
1 1YTTRIUM (III) ION
lig 5
NAG
B
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
CA
B
1000 1CALCIUM ION
lig 7
BCZ
B
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 8
NAG
C
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
CA
C
1000 1CALCIUM ION
lig 10
BCZ
C
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 11
NAG
D
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
CA
D
1000 1CALCIUM ION
lig 13
BCZ
D
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 14
YT3
E
2 1YTTRIUM (III) ION
lig 15
NAG
E
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
CA
E
1000 1CALCIUM ION
lig 17
BCZ
E
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 18
NAG
F
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
CA
F
1000 1CALCIUM ION
lig 20
BCZ
F
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 21
NAG
G
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
CA
G
1000 1CALCIUM ION
lig 23
BCZ
G
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 24
NAG
H
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
CA
H
1000 1CALCIUM ION
lig 26
BCZ
H
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 27
YT3
I
3 1YTTRIUM (III) ION
lig 28
NAG
I
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
CA
I
1000 1CALCIUM ION
lig 30
BCZ
I
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 31
NAG
J
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
CA
J
1000 1CALCIUM ION
lig 33
BCZ
J
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 34
NAG
K
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
CA
K
1000 1CALCIUM ION
lig 36
BCZ
K
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 37
NAG
L
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
CA
L
1000 1CALCIUM ION
lig 39
BCZ
L
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 40
YT3
M
4 1YTTRIUM (III) ION
lig 41
NAG
M
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
CA
M
1000 1CALCIUM ION
lig 43
BCZ
M
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 44
NAG
N
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
CA
N
1000 1CALCIUM ION
lig 46
BCZ
N
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 47
NAG
O
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 48
CA
O
1000 1CALCIUM ION
lig 49
BCZ
O
1001 23 CYCLOPENTANECARBOXYLIC ACID
lig 50
NAG
P
900 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
CA
P
1000 1CALCIUM ION
lig 52
BCZ
P
1001 23 CYCLOPENTANECARBOXYLIC ACID