Analysis of Ligand-Protein Contacts in PDB entry:
3K8D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 3K8D. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MG
A
1242 1MAGNESIUM ION
lig 2
KDO
A
1244 153-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC
lig 3
CTP
A
1243 29CYTIDINE-5'-TRIPHOSPHATE
lig 4
MG
B
1242 1MAGNESIUM ION
lig 5
KDO
B
1244 153-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC
lig 6
CTP
B
1243 29CYTIDINE-5'-TRIPHOSPHATE
lig 7
MG
C
1242 1MAGNESIUM ION
lig 8
KDO
C
1244 153-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC
lig 9
CTP
C
1243 29CYTIDINE-5'-TRIPHOSPHATE
lig 10
MG
D
1242 1MAGNESIUM ION
lig 11
KDO
D
1244 153-DEOXY-ALPHA-D-MANNO-OCT-2-ULOPYRANOSONIC
lig 12
CTP
D
1243 29CYTIDINE-5'-TRIPHOSPHATE